Publications

The main goal of our Cell Modeling Hackathon series is to catalyze new collaborations.    Several of these collaborations launched at the QCBNet Hackathons have resulted in publications:

 

  • Berro J. (2018). “Essentially, all models are wrong, but some are useful”—a cross-disciplinary agenda for building useful models in cell biology and biophysics. Biophys. Rev.. 10 (6), 1637.  DOI: 10.1007/s12551-018-0478-4

  • Daniel B. Cortes, Adriana Dawes, Jian Liu, Masoud Nickaeen, Wanda Strychalski, Amy Shaub Maddox (2018). Unite to divide – how models and biological experimentation have come together to reveal mechanisms of cytokinesis. J. Cell Sci.. 131 pii: jcs203570.  DOI: 10.1242/jcs.203570

  • Joshua Pan, Kaitlyn Johnson (2019). “Hacking” Our Way across Interdisciplinary Boundaries. Cell Systems. 8 361.  DOI: https://doi.org/10.1016/j.cels.2019.04.006

  • Lian Zhu, Yogesh Goyal (2019). Art & Science. EMBO Reports. 20 e47061. DOI: https://doi.org/10.15252/embr.201847061

  • Pan J, Meyers RM, Michel BC, Mashtalir N, Sizemore AE, Wells JN, Cassel SH, Vazquez F, Weir BA, Hahn WC, Marsh JA, Tsherniak A, Kadoch C (2018). Interrogation of Mammalian Protein Complex Structure, Function, and Membership Using Genome-Scale Fitness Screens. Cell Systems. 6 555-568.  DOI: 10.1016/j.cels.2018.04.011

  • Ma, R, Hendel N, Marshall WF, Qin HM.  2019.  Speed and diffusion of kinesin-2 are competing limiting factors in flagellar length control model.   bioRxiv  751990